软件包：canu（2.0+dfsg-1）

[ 源代码： canu  ]

single molecule sequence assembler for genomes

Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION).

Canu is a hierarchical assembly pipeline which runs in four steps:

 * Detect overlaps in high-noise sequences using MHAP
 * Generate corrected sequence consensus
 * Trim corrected sequences
 * Assemble trimmed corrected sequences

其他与 canu 有关的软件包

• dep: gnuplot

  Command-line driven interactive plotting program.
  同时作为一个虚包由这些包填实： gnuplot-nox, gnuplot-qt, gnuplot-x11

• dep: libc6 (>= 2.29)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libfilesys-df-perl

  Module to obtain filesystem disk space information

• dep: libgcc-s1 (>= 4.2)

  GCC 支持库

• dep: libgomp1 (>= 6)

  GCC OpenMP（GOMP）支持库

• dep: libstdc++6 (>= 5.2)

  GNU 标准 C++ 库，第3版

• dep: mhap (>= 2.1.3)

  locality-sensitive hashing to detect long-read overlaps

• dep: perl

  拉里 沃尔的实用报表提取语言(Perl)

• sug: nanopolish

  consensus caller for nanopore sequencing data

• sug: pbgenomicconsensus

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硬件架构	软件包大小	安装后大小	文件
mipsel	1,386.0 kB	11,249.0 kB	[文件列表]