软件包：libfastahack-dev（1.0.0+dfsg-7）

[ 源代码： libfastahack  ]

library for indexing and sequence extraction from FASTA files (devel)

fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use.

Features:

 * FASTA index (.fai) generation for FASTA files
 * Sequence extraction
 * Subsequence extraction
 * Sequence statistics (currently only entropy is provided)

Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence.

This is the development package containing the statically linked library and the header files.

标签: 软件开发: 函数库, 角色: 开发用函数库

其他与 libfastahack-dev 有关的软件包

• dep: libfastahack0 (= 1.0.0+dfsg-7)

  library for indexing and sequence extraction from FASTA files (lib)

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硬件架构	软件包大小	安装后大小	文件
amd64	26.4 kB	120.0 kB	[文件列表]
arm64	25.4 kB	115.0 kB	[文件列表]
armel	27.5 kB	110.0 kB	[文件列表]
armhf	27.8 kB	98.0 kB	[文件列表]
i386	29.2 kB	105.0 kB	[文件列表]
mips64el	29.2 kB	143.0 kB	[文件列表]
mipsel	30.1 kB	114.0 kB	[文件列表]
ppc64el	28.0 kB	127.0 kB	[文件列表]
s390x	25.0 kB	119.0 kB	[文件列表]