软件包：python3-dna-jellyfish（2.3.0-15 以及其他的）

[ 源代码： jellyfish  ]

count k-mers in DNA sequences (Python bindings of jellyfish)

JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.

JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.

This package contains the Python bindings of jellyfish.

其他与 python3-dna-jellyfish 有关的软件包

• dep: libc6 (>= 2.34)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libgcc-s1 (>= 3.0) [除 armel, armhf, i386]

  GCC 支持库

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386]

• dep: libjellyfish-2.0-2 (>= 2.3.0)

  count k-mers in DNA sequences (dynamic library of jellyfish)

• dep: libstdc++6 (>= 5.2) [armel, armhf]

  GNU 标准 C++ 库，第3版

  dep: libstdc++6 (>= 9) [除 armel, armhf]

• dep: python3

  交互式高级面向对象语言（默认 python3 版本）

  dep: python3 (<< 3.12)

  dep: python3 (>= 3.11~)

下载 python3-dna-jellyfish

下载可用于所有硬件架构的

硬件架构	版本	软件包大小	安装后大小	文件
amd64	2.3.0-15+b3	52.1 kB	175.0 kB	[文件列表]
arm64	2.3.0-15+b3	49.6 kB	171.0 kB	[文件列表]
armel	2.3.0-15+b3	51.9 kB	168.0 kB	[文件列表]
armhf	2.3.0-15+b3	52.8 kB	140.0 kB	[文件列表]
i386	2.3.0-15+b3	60.5 kB	184.0 kB	[文件列表]
mips64el	2.3.0-15+b3	50.5 kB	242.0 kB	[文件列表]
ppc64el	2.3.0-15+b3	55.1 kB	235.0 kB	[文件列表]