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[ 源代码: pizzly  ]

软件包:pizzly(0.37.3+ds-6)

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Identifies gene fusions in RNA sequencing data

For the interpretation of the transcriptome (the abundance and sequence of RNA) of tomour cells one is particularly interested in transcripts that cannot be mapped to single genes but that are seen to be fused as parts from two genes. Likely eplanations are chromosomal translocations.

Pizzly can identify novel such peculiarities, building on interpretations on variable splicing by the tool kallisto. Both tools are elements of the bcbio workflow.

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硬件架构 软件包大小 安装后大小 文件
amd64 287.4 kB875.0 kB [文件列表]
arm64 252.1 kB815.0 kB [文件列表]
mips64el 246.6 kB965.0 kB [文件列表]
ppc64el 282.7 kB991.0 kB [文件列表]
s390x 250.0 kB879.0 kB [文件列表]