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[ Source: embassy-domalign  ]

Package: embassy-domalign (0.1.0+20110714-1)

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Extra EMBOSS commands for protein domain alignment

The DOMALIGN programs were developed by Jon Ison and colleagues at MRC HGMP for their protein domain research. They are included as an EMBASSY package as a work in progress.

Applications in the current domalign release are allversusall (sequence similarity data from all-versus-all comparison), domainalign (generates alignments (DAF file) for nodes in a DCF file), domainrep (reorders DCF file to identify representative structures) and seqalign (extend alignments (DAF file) with sequences (DHF file)).

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Application Suite: suite::TODO, use::analysing, Purpose: Comparing, Editing, Supports Format: works-with-format::TODO, works-with-format::plaintext, Works with: Need an extra tag

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Architecture Package Size Installed Size Files
amd64 111.5 kB643.0 kB [list of files]
armel 113.9 kB627.0 kB [list of files]
armhf 109.8 kB623.0 kB [list of files]
i386 112.2 kB635.0 kB [list of files]
ia64 115.9 kB682.0 kB [list of files]
kfreebsd-amd64 111.6 kB576.0 kB [list of files]
kfreebsd-i386 111.2 kB569.0 kB [list of files]
mips 105.2 kB633.0 kB [list of files]
mipsel 112.3 kB633.0 kB [list of files]
powerpc 111.4 kB635.0 kB [list of files]
s390 114.6 kB635.0 kB [list of files]
s390x 115.7 kB654.0 kB [list of files]
sparc 109.6 kB637.0 kB [list of files]