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[ Source: probcons  ]

Package: probcons (1.12-9 and others)

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PROBabilistic CONSistency-based multiple sequence alignment

Tool for generating multiple alignments of protein sequences. Using a combination of probabilistic modeling and consistency-based alignment techniques, PROBCONS has achieved the highest accuracies of all alignment methods to date. On the BAliBASE benchmark alignment database, alignments produced by PROBCONS show statistically significant improvement over current programs, containing an average of 7% more correctly aligned columns than those of T-Coffee, 11% more correctly aligned columns than those of CLUSTAL W, and 14% more correctly aligned columns than those of DIALIGN.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

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Download probcons

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 1.12-9 235.6 kB482.0 kB [list of files]
amd64 1.12-9 191.2 kB452.0 kB [list of files]
arm64 (unofficial port) 1.12-9 115.4 kB391.0 kB [list of files]
armel 1.12-9 159.6 kB353.0 kB [list of files]
armhf 1.12-9 152.8 kB282.0 kB [list of files]
hppa (unofficial port) 1.12-9 127.0 kB428.0 kB [list of files]
hurd-i386 1.12-9+b1 159.5 kB373.0 kB [list of files]
i386 1.12-9 157.4 kB378.0 kB [list of files]
kfreebsd-amd64 1.12-9 191.4 kB420.0 kB [list of files]
kfreebsd-i386 1.12-9 157.2 kB347.0 kB [list of files]
m68k (unofficial port) 1.12-9 145.9 kB360.0 kB [list of files]
mips 1.12-9 198.5 kB416.0 kB [list of files]
mipsel 1.12-9 200.4 kB416.0 kB [list of files]
powerpc 1.12-9 205.6 kB395.0 kB [list of files]
powerpcspe (unofficial port) 1.12-9 225.5 kB398.0 kB [list of files]
ppc64 (unofficial port) 1.12-9 215.9 kB438.0 kB [list of files]
s390x 1.12-9 201.4 kB482.0 kB [list of files]
sh4 (unofficial port) 1.12-9 182.0 kB347.0 kB [list of files]
sparc 1.12-9 181.8 kB396.0 kB [list of files]
sparc64 (unofficial port) 1.12-9 193.7 kB418.0 kB [list of files]
x32 (unofficial port) 1.12-9 228.8 kB503.0 kB [list of files]