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[ Source: probcons  ]

Package: probcons (1.12-11)

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PROBabilistic CONSistency-based multiple sequence alignment

Tool for generating multiple alignments of protein sequences. Using a combination of probabilistic modeling and consistency-based alignment techniques, PROBCONS has achieved the highest accuracies of all alignment methods to date. On the BAliBASE benchmark alignment database, alignments produced by PROBCONS show statistically significant improvement over current programs, containing an average of 7% more correctly aligned columns than those of T-Coffee, 11% more correctly aligned columns than those of CLUSTAL W, and 14% more correctly aligned columns than those of DIALIGN.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

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Download probcons

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 123.0 kB415.0 kB [list of files]
amd64 104.9 kB357.0 kB [list of files]
arm64 102.1 kB325.0 kB [list of files]
armel 92.0 kB320.0 kB [list of files]
armhf 89.3 kB244.0 kB [list of files]
hppa (unofficial port) 117.0 kB363.0 kB [list of files]
hurd-i386 97.3 kB348.0 kB [list of files]
i386 97.3 kB344.0 kB [list of files]
kfreebsd-amd64 104.4 kB361.0 kB [list of files]
kfreebsd-i386 97.3 kB344.0 kB [list of files]
m68k (unofficial port) 87.1 kB332.0 kB [list of files]
mips 106.1 kB403.0 kB [list of files]
mips64el 110.1 kB406.0 kB [list of files]
mipsel 109.1 kB407.0 kB [list of files]
powerpc 108.1 kB412.0 kB [list of files]
powerpcspe (unofficial port) 112.3 kB412.0 kB [list of files]
ppc64 (unofficial port) 112.9 kB413.0 kB [list of files]
ppc64el 113.5 kB413.0 kB [list of files]
s390x 101.2 kB409.0 kB [list of files]
sh4 (unofficial port) 120.4 kB308.0 kB [list of files]
sparc64 (unofficial port) 102.6 kB371.0 kB [list of files]
x32 (unofficial port) 108.7 kB360.0 kB [list of files]