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[ Source: probcons  ]

Package: probcons (1.12-12)

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PROBabilistic CONSistency-based multiple sequence alignment

Tool for generating multiple alignments of protein sequences. Using a combination of probabilistic modeling and consistency-based alignment techniques, PROBCONS has achieved the highest accuracies of all alignment methods to date. On the BAliBASE benchmark alignment database, alignments produced by PROBCONS show statistically significant improvement over current programs, containing an average of 7% more correctly aligned columns than those of T-Coffee, 11% more correctly aligned columns than those of CLUSTAL W, and 14% more correctly aligned columns than those of DIALIGN.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

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Download probcons

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 134.3 kB400.0 kB [list of files]
amd64 113.1 kB366.0 kB [list of files]
arm64 108.5 kB318.0 kB [list of files]
armel 96.2 kB317.0 kB [list of files]
armhf 93.9 kB237.0 kB [list of files]
hppa (unofficial port) 124.2 kB352.0 kB [list of files]
i386 101.5 kB341.0 kB [list of files]
m68k (unofficial port) 92.1 kB325.0 kB [list of files]
mips64el 121.0 kB391.0 kB [list of files]
mipsel 121.6 kB396.0 kB [list of files]
ppc64 (unofficial port) 130.3 kB414.0 kB [list of files]
ppc64el 131.9 kB414.0 kB [list of files]
riscv64 (unofficial port) 126.6 kB296.0 kB [list of files]
s390x 98.8 kB362.0 kB [list of files]
sh4 (unofficial port) 129.8 kB306.0 kB [list of files]
sparc64 (unofficial port) 108.3 kB356.0 kB [list of files]
x32 (unofficial port) 116.2 kB365.0 kB [list of files]