Package: poa (2.0+20060928-8 and others)

[ Source: poa  ]

Partial Order Alignment for multiple sequence alignment

POA is Partial Order Alignment, a fast program for multiple sequence alignment (MSA) in bioinformatics. Its advantages are speed, scalability, sensitivity, and the superior ability to handle branching / indels in the alignment. Partial order alignment is an approach to MSA, which can be combined with existing methods such as progressive alignment. POA optimally aligns a pair of MSAs and which therefore can be applied directly to progressive alignment methods such as CLUSTAL. For large alignments, Progressive POA is 10-30 times faster than CLUSTALW.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: scope::utility, works-with-format::plaintext, Works with: Need an extra tag

Other Packages Related to poa

• dep: libc6 (>= 2.11) [hppa]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.14) [amd64]

  dep: libc6 (>= 2.16) [x32]

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.30) [sh4]

  dep: libc6 (>= 2.34) [riscv64]

  dep: libc6 (>= 2.7) [armel, armhf, i386, m68k, mips64el, mipsel, ppc64, s390x, sparc64]

• dep: libc6.1 (>= 2.30) [ia64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.7) [alpha]

• sug: blast2

  Package not available

• enh: t-coffee

  Multiple Sequence Alignment

Download poa

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.0+20060928-8	52.2 kB	152.0 kB	[list of files]
amd64	2.0+20060928-8	52.0 kB	140.0 kB	[list of files]
arm64	2.0+20060928-8	49.0 kB	131.0 kB	[list of files]
armel	2.0+20060928-8	49.6 kB	135.0 kB	[list of files]
armhf	2.0+20060928-8	47.8 kB	111.0 kB	[list of files]
hppa (unofficial port)	2.0+20060928-8	49.1 kB	132.0 kB	[list of files]
i386	2.0+20060928-8	52.6 kB	147.0 kB	[list of files]
ia64 (unofficial port)	2.0+20060928-8	63.2 kB	205.0 kB	[list of files]
m68k (unofficial port)	2.0+20060928-8	45.4 kB	127.0 kB	[list of files]
mips64el	2.0+20060928-8	49.9 kB	156.0 kB	[list of files]
mipsel	2.0+20060928-8	49.1 kB	143.0 kB	[list of files]
ppc64 (unofficial port)	2.0+20060928-8	55.0 kB	184.0 kB	[list of files]
ppc64el	2.0+20060928-8	56.1 kB	184.0 kB	[list of files]
riscv64 (unofficial port)	2.0+20060928-8+b1	49.1 kB	116.0 kB	[list of files]
s390x	2.0+20060928-8	49.6 kB	139.0 kB	[list of files]
sh4 (unofficial port)	2.0+20060928-8	55.1 kB	123.0 kB	[list of files]
sparc64 (unofficial port)	2.0+20060928-8	46.5 kB	137.0 kB	[list of files]
x32 (unofficial port)	2.0+20060928-8	51.5 kB	131.0 kB	[list of files]