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[ Source: melting  ]

Package: melting (4.3.1+dfsg-2 and others)

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compute the melting temperature of nucleic acid duplex

This program computes, for a nucleic acid duplex, the enthalpy, the entropy and the melting temperature of the helix-coil transitions. Three types of hybridisation are possible: DNA/DNA, DNA/RNA, and RNA/RNA. The program first computes the hybridisation enthalpy and entropy from the elementary parameters of each Crick's pair by the nearest-neighbor method. Then the melting temperature is computed. The set of thermodynamic parameters can be easily changed, for instance following an experimental breakthrough.

Tags: Field: Biology, Molecular Biology, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Application Suite: suite::gnu, use::analysing, Supports Format: Plain Text, Works with: Need an extra tag

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Download melting

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 4.3.1+dfsg-2 648.1 kB868.0 kB [list of files]
amd64 4.3.1+dfsg-2 647.6 kB860.0 kB [list of files]
arm64 4.3.1+dfsg-2 645.4 kB856.0 kB [list of files]
armel 4.3.1+dfsg-2 647.0 kB859.0 kB [list of files]
armhf 4.3.1+dfsg-2 644.9 kB847.0 kB [list of files]
hppa (unofficial port) 4.3.1+dfsg-2 647.1 kB860.0 kB [list of files]
hurd-i386 4.3.1+dfsg-2 646.6 kB859.0 kB [list of files]
i386 4.3.1+dfsg-2 646.9 kB859.0 kB [list of files]
kfreebsd-amd64 4.3.1+dfsg-2 646.6 kB860.0 kB [list of files]
kfreebsd-i386 4.3.1+dfsg-2 646.5 kB859.0 kB [list of files]
m68k (unofficial port) 4.3.1+dfsg-2 642.9 kB859.0 kB [list of files]
mips 4.3.1+dfsg-2 646.0 kB860.0 kB [list of files]
mipsel 4.3.1+dfsg-2 646.1 kB860.0 kB [list of files]
powerpc 4.3.1+dfsg-2 645.5 kB875.0 kB [list of files]
powerpcspe (unofficial port) 4.3.1+dfsg-1 646.3 kB798.0 kB [list of files]
ppc64 (unofficial port) 4.3.1+dfsg-2 646.8 kB876.0 kB [list of files]
ppc64el 4.3.1+dfsg-2 646.0 kB876.0 kB [list of files]
s390x 4.3.1+dfsg-2 645.9 kB860.0 kB [list of files]
sh4 (unofficial port) 4.3.1+dfsg-2 646.9 kB851.0 kB [list of files]
sparc64 (unofficial port) 4.3.1+dfsg-2 646.2 kB861.0 kB [list of files]
x32 (unofficial port) 4.3.1+dfsg-2 646.4 kB855.0 kB [list of files]