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[ Source: melting  ]

Package: melting (4.3.1+dfsg-3)

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compute the melting temperature of nucleic acid duplex

This program computes, for a nucleic acid duplex, the enthalpy, the entropy and the melting temperature of the helix-coil transitions. Three types of hybridisation are possible: DNA/DNA, DNA/RNA, and RNA/RNA. The program first computes the hybridisation enthalpy and entropy from the elementary parameters of each Crick's pair by the nearest-neighbor method. Then the melting temperature is computed. The set of thermodynamic parameters can be easily changed, for instance following an experimental breakthrough.

Tags: Field: Biology, Bioinformatics, field::biology:molecular, implemented-in::c, User Interface: Command Line, Role: role::program, scope::utility, Application Suite: GNU, Purpose: use::analysing, works-with-format::plaintext, Works with: Need an extra tag

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Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 647.0 kB869.0 kB [list of files]
amd64 647.3 kB861.0 kB [list of files]
arm64 645.4 kB857.0 kB [list of files]
armel 647.9 kB864.0 kB [list of files]
armhf 645.8 kB848.0 kB [list of files]
hppa (unofficial port) 646.8 kB857.0 kB [list of files]
hurd-i386 646.7 kB860.0 kB [list of files]
i386 647.3 kB860.0 kB [list of files]
kfreebsd-amd64 647.3 kB861.0 kB [list of files]
kfreebsd-i386 647.3 kB860.0 kB [list of files]
m68k (unofficial port) 643.3 kB860.0 kB [list of files]
mips 645.8 kB861.0 kB [list of files]
mips64el 646.1 kB870.0 kB [list of files]
mipsel 646.0 kB865.0 kB [list of files]
powerpc 646.0 kB876.0 kB [list of files]
powerpcspe (unofficial port) 646.3 kB876.0 kB [list of files]
ppc64 (unofficial port) 646.2 kB878.0 kB [list of files]
ppc64el 646.8 kB877.0 kB [list of files]
s390x 646.4 kB865.0 kB [list of files]
sh4 (unofficial port) 647.5 kB856.0 kB [list of files]
sparc64 (unofficial port) 645.9 kB870.0 kB [list of files]
x32 (unofficial port) 647.0 kB856.0 kB [list of files]