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MCMC linkage analysis on general pedigrees

Performs Markov chain Monte Carlo multipoint linkage analysis on large, complex pedigrees. The current package supports analyses on quantitative traits only, although this restriction will be lifted in later versions. Joint estimation of QTL number, position and effects uses Reversible Jump MCMC. It is also possible to perform affected only IBD sharing analyses.

Tags: Field: Biology, Implemented in: C, User Interface: interface::commandline, role::program, Scope: Utility, Purpose: Need an extra tag, use::analysing, works-with-format::TODO, Works with: Need an extra tag

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Download loki

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 342.1 kB940.0 kB [list of files]
amd64 338.7 kB852.0 kB [list of files]
arm64 292.2 kB738.0 kB [list of files]
armel 291.7 kB807.0 kB [list of files]
armhf 300.6 kB619.0 kB [list of files]
hppa (unofficial port) 318.0 kB810.0 kB [list of files]
hurd-i386 319.9 kB855.0 kB [list of files]
i386 319.2 kB851.0 kB [list of files]
kfreebsd-amd64 338.0 kB852.0 kB [list of files]
kfreebsd-i386 319.4 kB851.0 kB [list of files]
m68k (unofficial port) 263.8 kB742.0 kB [list of files]
mips 312.8 kB879.0 kB [list of files]
mipsel 316.8 kB887.0 kB [list of files]
powerpc 304.5 kB1,039.0 kB [list of files]
powerpcspe (unofficial port) 327.1 kB834.0 kB [list of files]
ppc64 (unofficial port) 318.5 kB1,046.0 kB [list of files]
ppc64el 319.3 kB1,040.0 kB [list of files]
s390x 324.7 kB910.0 kB [list of files]
sh4 (unofficial port) 379.6 kB730.0 kB [list of files]
sparc64 (unofficial port) 305.4 kB816.0 kB [list of files]
x32 (unofficial port) 333.7 kB840.0 kB [list of files]