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[ Source: kalign  ]

Package: kalign (1:3.3.5-1)

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Global and progressive multiple sequence alignment

Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Muth-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

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Download kalign

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 88.4 kB407.0 kB [list of files]
amd64 128.4 kB1,037.0 kB [list of files]
arm64 81.0 kB405.0 kB [list of files]
armel 78.9 kB303.0 kB [list of files]
armhf 76.2 kB247.0 kB [list of files]
hppa (unofficial port) 82.6 kB322.0 kB [list of files]
i386 88.5 kB339.0 kB [list of files]
ia64 (unofficial port) 101.1 kB522.0 kB [list of files]
m68k (unofficial port) 82.2 kB307.0 kB [list of files]
mips64el 79.1 kB418.0 kB [list of files]
mipsel 78.5 kB416.0 kB [list of files]
ppc64 (unofficial port) 91.3 kB469.0 kB [list of files]
ppc64el 91.9 kB405.0 kB [list of files]
riscv64 (unofficial port) 80.3 kB263.0 kB [list of files]
s390x 82.6 kB321.0 kB [list of files]
sh4 (unofficial port) 88.1 kB339.0 kB [list of files]
sparc64 (unofficial port) 75.8 kB2,136.0 kB [list of files]
x32 (unofficial port) 86.0 kB311.0 kB [list of files]