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[ Source: kalign  ]

Package: kalign (1:2.03+20110620-3)

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Global and progressive multiple sequence alignment

Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Muth-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

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Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 90.0 kB290.0 kB [list of files]
amd64 97.4 kB273.0 kB [list of files]
arm64 83.5 kB237.0 kB [list of files]
armel 78.1 kB236.0 kB [list of files]
armhf 73.3 kB164.0 kB [list of files]
hppa (unofficial port) 75.9 kB217.0 kB [list of files]
hurd-i386 85.7 kB252.0 kB [list of files]
i386 84.6 kB244.0 kB [list of files]
kfreebsd-amd64 98.7 kB273.0 kB [list of files]
kfreebsd-i386 84.6 kB244.0 kB [list of files]
m68k (unofficial port) 69.9 kB208.0 kB [list of files]
mips 78.4 kB251.0 kB [list of files]
mips64el 83.2 kB269.0 kB [list of files]
mipsel 79.5 kB259.0 kB [list of files]
powerpc 76.7 kB288.0 kB [list of files]
powerpcspe (unofficial port) 86.2 kB288.0 kB [list of files]
ppc64 (unofficial port) 83.2 kB289.0 kB [list of files]
ppc64el 96.0 kB353.0 kB [list of files]
s390x 87.5 kB281.0 kB [list of files]
sh4 (unofficial port) 92.0 kB188.0 kB [list of files]
sparc64 (unofficial port) 74.7 kB234.0 kB [list of files]
x32 (unofficial port) 95.7 kB272.0 kB [list of files]