Package: biosquid (1.9g+cvs20050121-12)

[ Source: biosquid  ]

utilities for biological sequence analysis

SQUID is a library of C code functions for sequence analysis. It also includes a number of small utility programs to convert, show statistics, manipulate and do other functions on sequence files.

The original name of the package is "squid", but since there is already a squid on the archive (a proxy cache), it was renamed to "biosquid".

This package contains some tools to demonstrate the features of the SQUID library.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, use::converting, Editing, Supports Format: works-with-format::TODO, works-with::TODO

Other Packages Related to biosquid

• dep: libc6 (>= 2.11) [hppa]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.16) [x32]

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.31) [sh4]

  dep: libc6 (>= 2.4) [not alpha, arm64, hppa, ia64, ppc64el, riscv64, sh4, x32]

• dep: libc6.1 (>= 2.31) [ia64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.4) [alpha]

• dep: libsquid1 (= 1.9g+cvs20050121-12)

  biosquid dynamic library for biological sequence analysis

• rec: hmmer

  profile hidden Markov models for protein sequence analysis

Download biosquid

Download for all available architectures

Architecture	Package Size	Installed Size	Files
alpha (unofficial port)	80.5 kB	356.0 kB	[list of files]
amd64	77.5 kB	356.0 kB	[list of files]
arm64	73.9 kB	307.0 kB	[list of files]
armel	71.6 kB	290.0 kB	[list of files]
armhf	69.2 kB	227.0 kB	[list of files]
hppa (unofficial port)	73.8 kB	277.0 kB	[list of files]
i386	77.5 kB	331.0 kB	[list of files]
ia64 (unofficial port)	90.7 kB	466.0 kB	[list of files]
m68k (unofficial port)	74.1 kB	301.0 kB	[list of files]
mips64el	75.1 kB	335.0 kB	[list of files]
mipsel	73.4 kB	291.0 kB	[list of files]
ppc64 (unofficial port)	82.6 kB	922.0 kB	[list of files]
ppc64el	83.6 kB	922.0 kB	[list of files]
riscv64 (unofficial port)	71.3 kB	270.0 kB	[list of files]
s390x	74.5 kB	323.0 kB	[list of files]
sh4 (unofficial port)	79.0 kB	265.0 kB	[list of files]
sparc64 (unofficial port)	70.4 kB	343.0 kB	[list of files]
x32 (unofficial port)	76.4 kB	324.0 kB	[list of files]