Package: sambamba (1.0.1+dfsg-3)

[ Source: sambamba  ]

tools for working with SAM/BAM data

Sambamba positions itself as a performant alternative to samtools and provides tools for

 * Powerful filtering with sambamba view --filter
 * Picard-like SAM header merging in the merge tool
 * Optional for operations on whole BAMs
 * Fast copying of a region to a new file with the slice tool
 * Duplicate marking/removal, using the Picard criteria

Other Packages Related to sambamba

• dep: libc6 (>= 2.34) [not loong64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.41) [loong64]

• dep: libgcc-s1 (>= 3.0)

  GCC support library

• dep: liblz4-1 (>= 0.0~r127)

  Fast LZ compression algorithm library - runtime

• dep: libphobos2-ldc-shared111 (>= 1:1.41.0)

  LLVM D Compiler - Standard and runtime libraries

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

Download sambamba

Download for all available architectures

Architecture	Package Size	Installed Size	Files
amd64	562.3 kB	2,452.0 kB	[list of files]
arm64	505.9 kB	2,428.0 kB	[list of files]
loong64 (unofficial port)	509.7 kB	2,553.0 kB	[list of files]
riscv64	588.7 kB	2,490.0 kB	[list of files]