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[ Source: pairtools  ]

Package: python3-pairtools-dbg (0.3.0-2 and others)

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Process sequencing data from a Hi-C experiment (debug build)

Debug files for python3-pairtools, a simple and fast command-line framework to process sequencing data from a Hi-C experiment.

Process pair-end sequence alignments and perform the following operations:

  - Detect ligation junctions (a.k.a. Hi-C pairs) in aligned paired-end
    sequences of Hi-C DNA molecules
  - Sort .pairs files for downstream analyses
  - Detect, tag and remove PCR/optical duplicates
  - Generate extensive statistics of Hi-C datasets
  - Select Hi-C pairs given flexibly defined criteria
  - Restore .sam alignments from Hi-C pairs

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Download python3-pairtools-dbg

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 0.3.0-2+b2 696.7 kB2,011.0 kB [list of files]
amd64 0.3.0-2+b2 714.6 kB1,995.0 kB [list of files]
arm64 0.3.0-2+b2 701.5 kB2,015.0 kB [list of files]
armel 0.3.0-2+b2 679.8 kB1,589.0 kB [list of files]
armhf 0.3.0-2+b2 686.4 kB1,537.0 kB [list of files]
hppa (unofficial port) 0.3.0-2+b2 668.0 kB1,610.0 kB [list of files]
i386 0.3.0-2+b2 672.5 kB1,545.0 kB [list of files]
m68k (unofficial port) 0.3.0-2+b2 654.2 kB1,553.0 kB [list of files]
mips64el 0.3.0-2+b2 716.3 kB2,079.0 kB [list of files]
mipsel 0.3.0-2+b2 688.9 kB1,639.0 kB [list of files]
ppc64 (unofficial port) 0.3.0-2+b2 727.6 kB2,175.0 kB [list of files]
ppc64el 0.3.0-2+b2 723.8 kB2,168.0 kB [list of files]
riscv64 (unofficial port) 0.3.0-2+b2 640.6 kB1,891.0 kB [list of files]
s390x 0.3.0-2+b2 696.1 kB2,000.0 kB [list of files]
sh4 (unofficial port) 0.3.0-2+b2 641.0 kB1,424.0 kB [list of files]
sparc64 (unofficial port) 0.3.0-2+b2 683.8 kB1,991.0 kB [list of files]
x32 (unofficial port) 0.3.0-2+b2 687.4 kB1,538.0 kB [list of files]