Package: python3-edlib (1.2.7-7 and others)

[ Source: libedlib  ]

library for sequence alignment using edit distance (Python3 module)

A lightweight and super fast C/C++ library for sequence alignment using edit distance.

Calculating edit distance of two strings is as simple as:

 edlibAlign("hello", 5, "world!", 6,
            edlibDefaultAlignConfig()).editDistance;

Features

 * Calculates edit distance (Levehnstein distance).
 * It can find optimal alignment path (instructions how to transform
   first sequence into the second sequence).
 * It can find just the start and/or end locations of alignment path -
   can be useful when speed is more important than having exact
   alignment path.
 * Supports multiple alignment methods: global(NW), prefix(SHW) and
   infix(HW), each of them useful for different scenarios.
 * You can extend character equality definition, enabling you to e.g.
   have wildcard characters, to have case insensitive alignment or to
   work with degenerate nucleotides.
 * It can easily handle small or very large sequences, even when finding
   alignment path, while consuming very little memory.
 * Super fast thanks to Myers's bit-vector algorithm.

This package contains the Python3 module.

Other Packages Related to python3-edlib

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.16) [x32]

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.2) [hppa]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.4) [armhf, i386, m68k, ppc64, s390x, sparc64]

  dep: libc6 (>= 2.41) [loong64, sh4]

• dep: libc6.1 (>= 2.1.3) [alpha]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [x32]

  GCC support library

  dep: libgcc-s1 (>= 3.3.1) [not armhf, hppa, ia64, m68k, x32]

  dep: libgcc-s1 (>= 3.5) [armhf]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support library

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: python3 (<< 3.13) [ia64, x32]

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.15) [not ia64, x32]

  dep: python3 (>= 3.11~) [ia64]

  dep: python3 (>= 3.12~) [x32]

  dep: python3 (>= 3.13~) [not ia64, x32]

Download python3-edlib

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1.2.7-7+b1	86.1 kB	418.0 kB	[list of files]
amd64	1.2.7-7+b1	92.8 kB	358.0 kB	[list of files]
arm64	1.2.7-7+b1	83.6 kB	414.0 kB	[list of files]
armhf	1.2.7-7+b1	81.9 kB	282.0 kB	[list of files]
hppa (unofficial port)	1.2.7-7+b1	84.1 kB	346.0 kB	[list of files]
i386	1.2.7-7+b1	92.4 kB	362.0 kB	[list of files]
ia64 (unofficial port)	1.2.7-5	108.5 kB	604.0 kB	[list of files]
loong64 (unofficial port)	1.2.7-7+b1	90.5 kB	414.0 kB	[list of files]
m68k (unofficial port)	1.2.7-7+b1	84.3 kB	330.0 kB	[list of files]
ppc64 (unofficial port)	1.2.7-7+b1	91.5 kB	542.0 kB	[list of files]
ppc64el	1.2.7-7+b1	93.9 kB	542.0 kB	[list of files]
riscv64	1.2.7-7+b1	88.1 kB	270.0 kB	[list of files]
s390x	1.2.7-7+b1	92.7 kB	374.0 kB	[list of files]
sh4 (unofficial port)	1.2.7-7+b1	100.5 kB	410.0 kB	[list of files]
sparc64 (unofficial port)	1.2.7-7+b1	79.2 kB	2,086.0 kB	[list of files]
x32 (unofficial port)	1.2.7-5+b1	63.9 kB	170.0 kB	[list of files]