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[ Source: provean  ]

Package: provean (1.1.5+ds-2)

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Protein Variation Effect Analyzer

PROVEAN (Protein Variation Effect Analyzer) is a software tool which predicts whether an amino acid substitution or indel has an impact on the biological function of a protein.

PROVEAN is useful for filtering sequence variants to identify nonsynonymous or indel variants that are predicted to be functionally important.

The performance of PROVEAN is comparable to popular tools such as SIFT or PolyPhen-2.

A fast computation approach to obtain pairwise sequence alignment scores enabled the generation of precomputed PROVEAN predictions for 20 single AA substitutions and a single AA deletion at every amino acid position of all protein sequences in human and mouse.

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Download provean

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 51.0 kB161.0 kB [list of files]
amd64 48.1 kB141.0 kB [list of files]
arm64 44.7 kB125.0 kB [list of files]
armel 45.4 kB132.0 kB [list of files]
armhf 47.1 kB108.0 kB [list of files]
hppa (unofficial port) 50.9 kB137.0 kB [list of files]
i386 51.0 kB144.0 kB [list of files]
ia64 (unofficial port) 61.8 kB228.0 kB [list of files]
mips64el 49.9 kB166.0 kB [list of files]
mipsel 50.1 kB160.0 kB [list of files]
ppc64 (unofficial port) 48.5 kB219.0 kB [list of files]
ppc64el 48.8 kB153.0 kB [list of files]
riscv64 (unofficial port) 48.9 kB121.0 kB [list of files]
s390x 44.1 kB137.0 kB [list of files]
sh4 (unofficial port) 50.0 kB120.0 kB [list of files]
sparc64 (unofficial port) 41.5 kB131.0 kB [list of files]
x32 (unofficial port) 46.4 kB128.0 kB [list of files]