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[ Source: proda  ]

Package: proda (1.0-12)

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multiple alignment of protein sequences

ProDA is a system for automated detection and alignment of homologous regions in collections of proteins with arbitrary domain architectures. Given an input set of unaligned sequences, ProDA identifies all homologous regions appearing in one or more sequences, and returns a collection of local multiple alignments for these regions.

Tags: Biology: Proteins, Field: Biology, field::biology:bioinformatics, implemented-in::c++, User Interface: Command Line, Role: role::program, scope::utility, Purpose: Analysing, use::comparing, works-with-format::plaintext, Works with: Need an extra tag

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Download proda

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 62.5 kB184.0 kB [list of files]
amd64 62.2 kB155.0 kB [list of files]
arm64 55.6 kB147.0 kB [list of files]
armel 52.5 kB139.0 kB [list of files]
armhf 52.5 kB107.0 kB [list of files]
hppa (unofficial port) 60.1 kB160.0 kB [list of files]
i386 62.2 kB163.0 kB [list of files]
m68k (unofficial port) 57.0 kB159.0 kB [list of files]
mips64el 66.1 kB199.0 kB [list of files]
mipsel 64.5 kB189.0 kB [list of files]
powerpcspe (unofficial port) 58.7 kB215.0 kB [list of files]
ppc64 (unofficial port) 66.5 kB216.0 kB [list of files]
ppc64el 66.9 kB215.0 kB [list of files]
riscv64 (unofficial port) 59.1 kB124.0 kB [list of files]
s390x 56.2 kB155.0 kB [list of files]
sh4 (unofficial port) 67.2 kB143.0 kB [list of files]
sparc64 (unofficial port) 54.5 kB169.0 kB [list of files]
x32 (unofficial port) 60.5 kB143.0 kB [list of files]