Package: pplacer (1.1~alpha19-6)

[ Source: pplacer  ]

phylogenetic placement and downstream analysis

Pplacer places reads on a phylogenetic tree. guppy (Grand Unified Phylogenetic Placement Yanalyzer) yanalyzes them. rppr is a helpful tool for working with reference packages.

Pplacer places query sequences on a fixed reference phylogenetic tree to maximize phylogenetic likelihood or posterior probability according to a reference alignment. Pplacer is designed to be fast, to give useful information about uncertainty, and to offer advanced visualization and downstream analysis.

Other Packages Related to pplacer

• dep: libc6 (>= 2.33)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgsl27 (>= 2.7.1)

  GNU Scientific Library (GSL) -- library package

• dep: libsqlite3-0 (>= 3.25.0)

  SQLite 3 shared library

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

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Download for all available architectures

Architecture	Package Size	Installed Size	Files
amd64	2,895.3 kB	18,060.0 kB	[list of files]
arm64	3,452.6 kB	21,020.0 kB	[list of files]
ppc64 (unofficial port)	3,036.3 kB	22,769.0 kB	[list of files]
ppc64el	3,054.6 kB	20,017.0 kB	[list of files]
riscv64 (unofficial port)	2,633.1 kB	17,330.0 kB	[list of files]
s390x	2,712.9 kB	19,926.0 kB	[list of files]