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[ Source: pbbam  ]

Package: pbbamtools (2.4.0+dfsg-1 and others)

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processing Pacific Biosciences binary alignment/map files

The BAM format is a binary, compressed, record-oriented container format for raw or aligned sequence reads. The associated SAM format is a text representation of the same data. The specifications for BAM/SAM are maintained by the SAM/BAM Format Specification Working Group.

PacBio-produced BAM files are fully compatible with the BAM specification, but makes use of the extensibility mechanisms of the BAM specification to encode PacBio-specific information.

This package provides command-line utilities for working with PacBio BAM files.

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Download pbbamtools

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 2.4.0+dfsg-1+b2 120.9 kB686.0 kB [list of files]
amd64 2.4.0+dfsg-1+b2 129.7 kB475.0 kB [list of files]
arm64 2.4.0+dfsg-1+b2 115.8 kB619.0 kB [list of files]
ia64 (unofficial port) 2.4.0+dfsg-1+b2 145.1 kB712.0 kB [list of files]
m68k (unofficial port) 1.3.0+dfsg-2 79.1 kB274.0 kB [list of files]
mips64el 2.4.0+dfsg-1+b2 120.5 kB703.0 kB [list of files]
ppc64el 2.4.0+dfsg-1+b2 126.8 kB683.0 kB [list of files]
riscv64 2.4.0+dfsg-1+b1 122.1 kB363.0 kB [list of files]
sh4 (unofficial port) 1.3.0+dfsg-2 88.0 kB256.0 kB [list of files]