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[ Source: tabix  ]

Package: tabix (0.2.6-2)

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generic indexer for TAB-delimited genome position files

Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosme), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name.

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Download tabix

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 49.9 kB182.0 kB [list of files]
amd64 45.8 kB149.0 kB [list of files]
arm64 (unofficial port) 41.3 kB140.0 kB [list of files]
armel 43.0 kB143.0 kB [list of files]
armhf 42.2 kB123.0 kB [list of files]
hppa (unofficial port) 47.3 kB157.0 kB [list of files]
hurd-i386 46.8 kB155.0 kB [list of files]
i386 46.7 kB151.0 kB [list of files]
kfreebsd-amd64 45.8 kB114.0 kB [list of files]
kfreebsd-i386 46.4 kB116.0 kB [list of files]
m68k (unofficial port) 42.2 kB108.0 kB [list of files]
mips 47.0 kB167.0 kB [list of files]
mipsel 46.3 kB163.0 kB [list of files]
powerpc 45.5 kB151.0 kB [list of files]
powerpcspe (unofficial port) 45.6 kB111.0 kB [list of files]
ppc64 (unofficial port) 44.6 kB163.0 kB [list of files]
s390x 47.8 kB168.0 kB [list of files]
sh4 (unofficial port) 52.0 kB155.0 kB [list of files]
sparc 44.8 kB156.0 kB [list of files]
sparc64 (unofficial port) 43.1 kB152.0 kB [list of files]
x32 (unofficial port) 45.6 kB143.0 kB [list of files]