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[ Source: gbrowse  ]

Package: gbrowse (2.54+dfsg-2)

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GMOD Generic Genome Browser

Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD). Some of its features:

 * Simultaneous bird's eye and detailed views of the genome;
 * Scroll, zoom, center;
 * Attach arbitrary URLs to any annotation;
 * Order and appearance of tracks are customizable by administrator and
   end-user;
 * Search by annotation ID, name, or comment;
 * Supports third party annotation using GFF formats;
 * Settings persist across sessions;
 * DNA and GFF dumps;
 * Connectivity to different databases, including BioSQL and Chado;
 * Multi-language support;
 * Third-party feature loading;
 * Customizable plug-in architecture (e.g. run BLAST, dump & import many
   formats, find oligonucleotides, design primers, create restriction maps,
   edit features).

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::perl, interface::web, Role: Program, Purpose: Analysing, use::viewing, web::application, World Wide Web: CGI

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Architecture Package Size Installed Size Files
all 2,605.4 kB6,785.0 kB [list of files]