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[ Source: htscodecs  ]

Package: libhtscodecs2 (0.5-3)

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Custom compression for CRAM and others

This library implements the custom CRAM codecs used for "EXTERNAL" block types. These consist of two variants of the rANS codec (8-bit and 16-bit renormalisation, with run-length encoding and bit-packing also supported in the latter), a dynamic arithmetic coder, and custom codecs for name/ID compression and quality score compression derived from fqzcomp.

They come with small command line test tools to act as both compression exploration programs and as part of the test harness.

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Architecture Package Size Installed Size Files
amd64 49.4 kB122.0 kB [list of files]
arm64 47.2 kB110.0 kB [list of files]
armel 48.9 kB122.0 kB [list of files]
armhf 47.4 kB90.0 kB [list of files]
hppa (unofficial port) 55.3 kB131.0 kB [list of files]
i386 51.9 kB126.0 kB [list of files]
m68k (unofficial port) 46.5 kB114.0 kB [list of files]
mips64el 53.1 kB129.0 kB [list of files]
mipsel 54.3 kB129.0 kB [list of files]
ppc64 (unofficial port) 57.0 kB147.0 kB [list of files]
ppc64el 56.7 kB146.0 kB [list of files]
riscv64 (unofficial port) 54.4 kB99.0 kB [list of files]
s390x 51.6 kB130.0 kB [list of files]
sh4 (unofficial port) 60.0 kB106.0 kB [list of files]
x32 (unofficial port) 48.4 kB114.0 kB [list of files]