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[ Source: kalign  ]

Package: kalign (1:2.03+20110620-5)

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Global and progressive multiple sequence alignment

Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Muth-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

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Download kalign

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 88.3 kB274.0 kB [list of files]
amd64 90.7 kB253.0 kB [list of files]
arm64 81.3 kB229.0 kB [list of files]
armel 73.7 kB216.0 kB [list of files]
armhf 69.1 kB156.0 kB [list of files]
hppa (unofficial port) 73.4 kB209.0 kB [list of files]
hurd-i386 81.4 kB232.0 kB [list of files]
i386 81.1 kB232.0 kB [list of files]
kfreebsd-amd64 91.1 kB249.0 kB [list of files]
kfreebsd-i386 81.1 kB228.0 kB [list of files]
m68k (unofficial port) 66.7 kB192.0 kB [list of files]
mips 74.8 kB235.0 kB [list of files]
mips64el 82.5 kB261.0 kB [list of files]
mipsel 75.6 kB235.0 kB [list of files]
powerpcspe (unofficial port) 80.9 kB288.0 kB [list of files]
ppc64 (unofficial port) 91.0 kB289.0 kB [list of files]
ppc64el 99.0 kB353.0 kB [list of files]
riscv64 (unofficial port) 80.6 kB174.0 kB [list of files]
s390x 88.6 kB305.0 kB [list of files]
sh4 (unofficial port) 87.2 kB176.0 kB [list of files]
sparc64 (unofficial port) 72.2 kB226.0 kB [list of files]
x32 (unofficial port) 88.0 kB244.0 kB [list of files]