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[ Source: elph  ]

Package: elph (1.0.1-5)

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DNA/protein sequence motif finder

ELPH (Estimated Locations of Pattern Hits) is a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences. The program takes as input a set containing anywhere from a few dozen to thousands of sequences, and searches through them for the most common motif, assuming that each sequence contains one copy of the motif. ELPH was used to find patterns such as ribosome binding sites (RBSs) and exon splicing enhancers (ESEs).

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Download elph

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 51.2 kB158.0 kB [list of files]
amd64 51.1 kB134.0 kB [list of files]
arm64 46.1 kB126.0 kB [list of files]
armel 42.8 kB117.0 kB [list of files]
armhf 43.7 kB89.0 kB [list of files]
hppa (unofficial port) 46.2 kB118.0 kB [list of files]
i386 53.7 kB145.0 kB [list of files]
m68k (unofficial port) 42.8 kB118.0 kB [list of files]
mips64el 50.2 kB151.0 kB [list of files]
mipsel 48.3 kB142.0 kB [list of files]
ppc64 (unofficial port) 55.8 kB215.0 kB [list of files]
ppc64el 56.3 kB214.0 kB [list of files]
riscv64 (unofficial port) 46.6 kB94.0 kB [list of files]
s390x 47.2 kB138.0 kB [list of files]
sh4 (unofficial port) 53.5 kB109.0 kB [list of files]
sparc64 (unofficial port) 42.3 kB128.0 kB [list of files]
x32 (unofficial port) 49.2 kB125.0 kB [list of files]