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[ Source: clustalx  ]

Package: clustalx (2.1+lgpl-8 and others)

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Multiple alignment of nucleic acid and protein sequences (graphical interface)

This package offers a GUI interface for the Clustal multiple sequence alignment program. It provides an integrated environment for performing multiple sequence- and profile-alignments to analyse the results. The sequence alignment is displayed in a window on the screen. A versatile coloring scheme has been incorporated to highlight conserved features in the alignment. For professional presentations, one should use the texshade LaTeX package or boxshade.

The pull-down menus at the top of the window allow you to select all the options required for traditional multiple sequence and profile alignment. You can cut-and-paste sequences to change the order of the alignment; you can select a subset of sequences to be aligned; you can select a sub-range of the alignment to be realigned and inserted back into the original alignment.

An alignment quality analysis can be performed and low-scoring segments or exceptional residues can be highlighted.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, User Interface: Graphical User Interface, interface::x11, role::program, Scope: Utility, Interface Toolkit: Lesstif/Motif, uitoolkit::qt, use::analysing, Purpose: Comparing, use::viewing, works-with-format::plaintext, Works with: Need an extra tag, X Window System: Application

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Download clustalx

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 2.1+lgpl-8 425.0 kB1,662.0 kB [list of files]
amd64 2.1+lgpl-8 435.7 kB1,374.0 kB [list of files]
arm64 2.1+lgpl-8 382.1 kB1,261.0 kB [list of files]
armel 2.1+lgpl-8 359.7 kB1,153.0 kB [list of files]
armhf 2.1+lgpl-8 372.4 kB885.0 kB [list of files]
hppa (unofficial port) 2.1+lgpl-8 433.1 kB1,493.0 kB [list of files]
i386 2.1+lgpl-8 465.9 kB1,433.0 kB [list of files]
m68k (unofficial port) 2.1+lgpl-8 422.8 kB1,409.0 kB [list of files]
mips64el 2.1+lgpl-8 391.6 kB1,679.0 kB [list of files]
mipsel 2.1+lgpl-8 391.2 kB1,614.0 kB [list of files]
powerpcspe (unofficial port) 2.1+lgpl-6 401.6 kB1,465.0 kB [list of files]
ppc64 (unofficial port) 2.1+lgpl-8 421.8 kB1,721.0 kB [list of files]
ppc64el 2.1+lgpl-8 424.1 kB1,593.0 kB [list of files]
riscv64 (unofficial port) 2.1+lgpl-8 421.9 kB1,134.0 kB [list of files]
s390x 2.1+lgpl-8 384.3 kB1,393.0 kB [list of files]
sh4 (unofficial port) 2.1+lgpl-8 511.9 kB1,287.0 kB [list of files]
sparc64 (unofficial port) 2.1+lgpl-8 357.6 kB1,350.0 kB [list of files]
x32 (unofficial port) 2.1+lgpl-8 435.6 kB1,285.0 kB [list of files]