Package: bali-phy (3.6.1+dfsg-2 and others)
Links for bali-phy
Debian Resources:
Download Source Package bali-phy:
Maintainers:
External Resources:
- Homepage [www.bali-phy.org]
Similar packages:
Bayesian Inference of Alignment and Phylogeny
BAli-Phy estimates multiple sequence alignments and evolutionary trees from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC to estimate evolutionary trees, positive selection, and branch lengths while averaging over alternative alignments. BAli-Phy can display alignment ambiguity graphically in an alignment uncertainty (AU) plot.
BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically estimates relative rates for each gene.
Other Packages Related to bali-phy
|
|
|
|
-
- dep: libboost-chrono1.71.0 [x32]
- Package not available
-
- dep: libboost-chrono1.74.0 (>= 1.74.0) [hppa, ia64]
- C++ representation of time duration, time point, and clocks
-
- dep: libboost-chrono1.83.0 (>= 1.83.0) [alpha, m68k]
- C++ representation of time duration, time point, and clocks
-
- dep: libboost-chrono1.83.0t64 (>= 1.83.0) [not alpha, hppa, ia64, m68k, x32]
- C++ representation of time duration, time point, and clocks
-
- dep: libboost-filesystem1.71.0 [x32]
- Package not available
-
- dep: libboost-filesystem1.74.0 (>= 1.74.0) [hppa, ia64]
- filesystem operations (portable paths, iteration over directories, etc) in C++
-
- dep: libboost-filesystem1.83.0 (>= 1.83.0) [not hppa, ia64, x32]
- filesystem operations (portable paths, iteration over directories, etc) in C++
-
- dep: libboost-program-options1.71.0 [x32]
- Package not available
-
- dep: libboost-program-options1.74.0 (>= 1.74.0) [hppa, ia64]
- program options library for C++
-
- dep: libboost-program-options1.83.0 (>= 1.83.0) [not hppa, ia64, x32]
- program options library for C++
-
- dep: libboost-random1.71.0 [x32]
- Package not available
-
- dep: libboost-random1.74.0 (>= 1.74.0) [hppa, ia64]
- Boost Random Number Library
-
- dep: libboost-random1.83.0 (>= 1.83.0) [not hppa, ia64, x32]
- Boost Random Number Library
-
- dep: libc6 (>= 2.29) [hppa, x32]
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.34) [not alpha, hppa, ia64, x32]
-
- dep: libc6.1 (>= 2.31) [ia64]
- GNU C Library: Shared libraries
also a virtual package provided by libc6.1-udeb
- dep: libc6.1 (>= 2.34) [alpha]
-
- dep: libcairo2 (>= 1.4.10)
- Cairo 2D vector graphics library
-
- dep: libgcc-s1 (>= 3.0) [ppc64el, s390x]
- GCC support library
- dep: libgcc-s1 (>= 3.4) [alpha, amd64, ppc64, sparc64, x32]
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
- dep: libgcc-s1 (>= 4.2) [i386, ia64]
- dep: libgcc-s1 (>= 4.5) [arm64, mips64el, riscv64]
-
- dep: libgcc-s2 (>= 4.2.1) [m68k]
- GCC support library
-
- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC support library
-
- dep: libstdc++6 (>= 13.1) [not alpha, hppa, ia64, x32]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 13.2.0-9) [alpha]
- dep: libstdc++6 (>= 9) [hppa, ia64, x32]
-
- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
-
- dep: perl
- Larry Wall's Practical Extraction and Report Language
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- rec: gnuplot
- Command-line driven interactive plotting program.
also a virtual package provided by gnuplot-nox, gnuplot-qt, gnuplot-x11
-
- rec: r-base
- GNU R statistical computation and graphics system
Download bali-phy
Architecture | Version | Package Size | Installed Size | Files |
---|---|---|---|---|
alpha (unofficial port) | 3.6.1+dfsg-2 | 6,094.0 kB | 39,082.0 kB | [list of files] |
amd64 | 3.6.1+dfsg-2+b1 | 6,382.7 kB | 37,532.0 kB | [list of files] |
arm64 | 3.6.1+dfsg-2+b1 | 5,733.5 kB | 35,384.0 kB | [list of files] |
armel | 3.6.1+dfsg-2+b1 | 4,895.0 kB | 31,410.0 kB | [list of files] |
armhf | 3.6.1+dfsg-2+b1 | 4,485.1 kB | 23,018.0 kB | [list of files] |
hppa (unofficial port) | 3.6.1+dfsg-1 | 6,099.3 kB | 37,152.0 kB | [list of files] |
i386 | 3.6.1+dfsg-2+b1 | 6,163.5 kB | 36,222.0 kB | [list of files] |
ia64 (unofficial port) | 3.6.1+dfsg-1 | 9,006.8 kB | 69,870.0 kB | [list of files] |
m68k (unofficial port) | 3.6.1+dfsg-2 | 5,531.7 kB | 34,830.0 kB | [list of files] |
mips64el | 3.6.1+dfsg-2+b1 | 5,714.9 kB | 43,529.0 kB | [list of files] |
ppc64 (unofficial port) | 3.6.1+dfsg-2+b1 | 5,936.4 kB | 42,892.0 kB | [list of files] |
ppc64el | 3.6.1+dfsg-2+b1 | 6,244.1 kB | 41,282.0 kB | [list of files] |
riscv64 | 3.6.1+dfsg-2+b3 | 6,366.5 kB | 30,588.0 kB | [list of files] |
s390x | 3.6.1+dfsg-2+b1 | 5,010.0 kB | 35,052.0 kB | [list of files] |
sparc64 (unofficial port) | 3.6.1+dfsg-2+b1 | 5,065.6 kB | 63,553.0 kB | [list of files] |
x32 (unofficial port) | 3.5.0.1+dfsg-1 | 5,788.7 kB | 33,442.0 kB | [list of files] |