[ Source: cnvkit ]
Пакунок: cnvkit (0.9.10-2)
Links for cnvkit
Debian Resources:
Download Source Package cnvkit:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Michael R. Crusoe (QA Page)
- Steffen Moeller (QA Page)
- Olivier Sallou (QA Page)
External Resources:
- Homepage [cnvkit.readthedocs.org]
Similar packages:
Copy number variant detection from targeted DNA sequencing
A command-line toolkit and Python library for detecting copy number variants and alterations genome-wide from targeted DNA sequencing. It is designed for use with hybrid capture, including both whole-exome and custom target panels, and short-read sequencing platforms such as Illumina and Ion Torrent.
Інші пакунки пов'язані з cnvkit
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-matplotlib
- Python based plotting system in a style similar to Matlab (Python 3)
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- dep: python3-numpy
- Fast array facility to the Python language (Python 3)
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- dep: python3-pandas
- data structures for "relational" or "labeled" data
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- dep: python3-pomegranate
- Fast, flexible and easy to use probabilistic modelling
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- dep: python3-pyfaidx
- efficient random access to fasta subsequences for Python 3
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: python3-reportlab
- Бібліотека ReportLab для створення PDF-документів за допомогою Python3
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: python3-sklearn
- Python modules for machine learning and data mining - Python 3
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- dep: r-bioc-dnacopy
- R package: DNA copy number data analysis
Завантажити cnvkit
| Архітектура | Розмір пакунка | Розмір після встановлення | Файли |
|---|---|---|---|
| all | 19,044.6 kB | 94,731.0 kB | [список файлів] |