[ Source: r-bioc-shortread ]
Пакунок: r-bioc-shortread (1.60.0-2 and others)
Links for r-bioc-shortread
Debian Resources:
Download Source Package r-bioc-shortread:
- [r-bioc-shortread_1.60.0-2.dsc]
- [r-bioc-shortread_1.60.0.orig.tar.gz]
- [r-bioc-shortread_1.60.0-2.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [bioconductor.org]
Similar packages:
GNU R classes and methods for high-throughput short-read sequencing data
This BioConductor module is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources.
Інші пакунки пов'язані з r-bioc-shortread
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- dep: libc6 (>= 2.14) [amd64]
- Бібліотека GNU C: спільні бібліотеки
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.16) [x32]
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.27) [riscv64]
- dep: libc6 (>= 2.37) [sh4]
- dep: libc6 (>= 2.7) [hppa, m68k, mips64el, ppc64, s390x, sparc64]
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- dep: libc6.1 (>= 2.37) [ia64]
- Бібліотека GNU C: спільні бібліотеки
also a virtual package provided by libc6.1-udeb
- dep: libc6.1 (>= 2.7) [alpha]
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- dep: libgcc-s1 (>= 3.0) [not hppa, ia64, m68k, sparc64]
- Допоміжна бібліотека GCC
- dep: libgcc-s1 (>= 4.2) [ia64]
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- dep: libgcc-s4 (>= 4.1.1) [hppa]
- Допоміжна бібліотека GCC
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- dep: libgcc1 (>= 1:3.0) [sparc64]
- Пакунок недоступний
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- dep: libgcc2 (>= 4.2.1) [m68k]
- Пакунок недоступний
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- dep: libgomp1 (>= 4.2.1) [m68k, sparc64]
- Підтримувальна бібліотека GCC OpenMP (GOMP)
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- dep: libstdc++6 (>= 11) [not m68k, sparc64]
- Стандартна бібліотека C++ GNU, версії 3
- dep: libstdc++6 (>= 5.2) [m68k, sparc64]
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- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
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- dep: r-api-3.4 [m68k]
- Пакунок недоступний
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- dep: r-api-3.5 [sparc64]
- Пакунок недоступний
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- dep: r-api-4.0 [not m68k, sparc64]
- virtual package provided by r-base-core
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- dep: r-api-bioc-3.16 [x32]
- Пакунок недоступний
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- dep: r-api-bioc-3.18 [not m68k, sparc64, x32]
- virtual package provided by r-bioc-biocgenerics
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- dep: r-api-bioc-3.8 [sparc64]
- Пакунок недоступний
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- dep: r-base-core (>= 3.4.3-1) [m68k]
- GNU R core of statistical computation and graphics system
- dep: r-base-core (>= 3.5.2-1) [sparc64]
- dep: r-base-core (>= 4.2.2.20221110-1) [x32]
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- dep: r-bioc-biobase
- base functions for Bioconductor
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- dep: r-bioc-biocgenerics (>= 0.23.3)
- generic functions for Bioconductor
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- dep: r-bioc-biocparallel
- BioConductor facilities for parallel evaluation
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- dep: r-bioc-biostrings (>= 2.37.1) [m68k]
- GNU R string objects representing biological sequences
- dep: r-bioc-biostrings (>= 2.47.6) [not m68k]
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- dep: r-bioc-genomeinfodb (>= 1.1.19) [m68k]
- BioConductor utilities for manipulating chromosome identifiers
- dep: r-bioc-genomeinfodb (>= 1.15.2) [not m68k]
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- dep: r-bioc-genomicalignments (>= 1.15.6) [not m68k]
- BioConductor representation and manipulation of short genomic alignments
- dep: r-bioc-genomicalignments (>= 1.5.4) [m68k]
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- dep: r-bioc-genomicranges (>= 1.21.6) [m68k]
- BioConductor representation and manipulation of genomic intervals
- dep: r-bioc-genomicranges (>= 1.31.8) [not m68k]
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- dep: r-bioc-iranges (>= 2.13.12) [not m68k]
- GNU R low-level containers for storing sets of integer ranges
- dep: r-bioc-iranges (>= 2.3.7) [m68k]
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- dep: r-bioc-rhtslib [not m68k, sparc64]
- HTSlib high-throughput sequencing library as GNU R package
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- dep: r-bioc-rsamtools (>= 1.21.4) [m68k]
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
- dep: r-bioc-rsamtools (>= 1.31.2) [not m68k]
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- dep: r-bioc-s4vectors (>= 0.13.8) [m68k]
- BioConductor S4 implementation of vectors and lists
- dep: r-bioc-s4vectors (>= 0.17.25) [not m68k]
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- dep: r-bioc-xvector [not m68k, sparc64]
- BioConductor representation and manpulation of external sequences
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- dep: r-bioc-zlibbioc [not m68k, sparc64]
- (Virtual) zlibbioc Bioconductor package
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- dep: r-cran-hwriter
- HTML Writer - Outputs R objects in HTML format
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- dep: r-cran-lattice
- GNU R package for 'Trellis' graphics
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- dep: r-cran-latticeextra
- GNU R package of additional graphical displays based on lattice
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- dep: zlib1g (>= 1:1.1.4)
- Бібліотека стискання даних (виконавчий модуль)
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- rec: r-cran-runit
- GNU R package providing unit testing framework
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- sug: r-bioc-biocstyle [not m68k, sparc64]
- standard styles for vignettes and other Bioconductor documents
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- sug: r-bioc-biomart
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
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- sug: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
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- sug: r-cran-runit [not sparc64]
- GNU R package providing unit testing framework
Завантажити r-bioc-shortread
| Архітектура | Версія | Розмір пакунка | Розмір після встановлення | Файли |
|---|---|---|---|---|
| alpha (unofficial port) | 1.60.0-2 | 5,065.2 kB | 7,559.0 kB | [список файлів] |
| amd64 | 1.60.0-2 | 5,068.8 kB | 7,507.0 kB | [список файлів] |
| arm64 | 1.60.0-2 | 5,063.6 kB | 7,557.0 kB | [список файлів] |
| hppa (unofficial port) | 1.60.0-2 | 5,064.8 kB | 7,527.0 kB | [список файлів] |
| ia64 (unofficial port) | 1.60.0-2 | 5,072.7 kB | 7,620.0 kB | [список файлів] |
| m68k (unofficial port) | 1.36.0-1 | 4,189.1 kB | 6,069.0 kB | [список файлів] |
| mips64el | 1.60.0-2 | 5,058.1 kB | 7,571.0 kB | [список файлів] |
| ppc64 (unofficial port) | 1.60.0-2 | 5,070.7 kB | 7,626.0 kB | [список файлів] |
| ppc64el | 1.60.0-2 | 5,069.7 kB | 7,621.0 kB | [список файлів] |
| riscv64 | 1.60.0-2 | 5,066.5 kB | 7,491.0 kB | [список файлів] |
| s390x | 1.60.0-2 | 5,067.5 kB | 7,521.0 kB | [список файлів] |
| sh4 (unofficial port) | 1.60.0-2 | 5,066.6 kB | 7,494.0 kB | [список файлів] |
| sparc64 (unofficial port) | 1.40.0-1 | 4,896.8 kB | 7,343.0 kB | [список файлів] |
| x32 (unofficial port) | 1.56.1-1 | 5,043.0 kB | 7,479.0 kB | [список файлів] |