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[ Kaynak: t-coffee  ]

Paket: t-coffee (11.00.8cbe486-5)

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Multiple Sequence Alignment

T-Coffee is a multiple sequence alignment package. Given a set of sequences (Proteins or DNA), T-Coffee generates a multiple sequence alignment. Version 2.00 and higher can mix sequences and structures.

T-Coffee allows the combination of a collection of multiple/pairwise, global or local alignments into a single model. It can also estimate the level of consistency of each position within the new alignment with the rest of the alignments. See the pre-print for more information

T-Coffee has a special called M-Coffee that makes it possible to combine the output of many multiple sequence alignment packages. In its published version, it uses MUSCLE, PROBCONS, POA, DiAlign-TS, MAFFT, Clustal W, PCMA and T-Coffee. A special version has been made for Debian, DM-Coffee, that uses only free software by replacing Clustal W by Kalign. Using the 8 Methods of M-Coffee can sometimes be a bit heavy. You can use a subset of your favorite methods if you prefer.

Etiketler: Alan: Biyoloji, Biyoinformatik, Geliştirildiği dil: implemented-in::c, interface::commandline, Rol: Program, Kapsam: Yardımcı Araç, Amaç: use::analysing, use::comparing, Desteklenen Biçimler: Ek etiket gerektiriyor, works-with-format::plaintext, works-with::TODO

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Tüm mevcut mimariler için indir
Mimari Paket Boyutu Kurulu Boyut Dosyalar
amd64 1.872,9 kB3.683,0 kB [dosya listesi]
arm64 1.752,5 kB3.559,0 kB [dosya listesi]
armel 1.713,4 kB3.506,0 kB [dosya listesi]
armhf 1.730,3 kB2.902,0 kB [dosya listesi]
i386 1.874,0 kB3.974,0 kB [dosya listesi]
mips 1.799,8 kB4.142,0 kB [dosya listesi]
mips64el 1.815,9 kB4.227,0 kB [dosya listesi]
mipsel 1.811,7 kB4.142,0 kB [dosya listesi]
ppc64el 1.843,8 kB4.139,0 kB [dosya listesi]
s390x 1.764,5 kB3.863,0 kB [dosya listesi]