Paket: edlib-aligner (1.2.7-5)

[ Kaynak: libedlib  ]

edlib sequence alignment tool using edit distance

Edlib is a lightweight and super fast C/C++ library for sequence alignment using edit distance. This package provides an aligner using this library.

Features of libedlib

 * Calculates edit distance (Levehnstein distance).
 * It can find optimal alignment path (instructions how to transform
   first sequence into the second sequence).
 * It can find just the start and/or end locations of alignment path -
   can be useful when speed is more important than having exact
   alignment path.
 * Supports multiple alignment methods: global(NW), prefix(SHW) and
   infix(HW), each of them useful for different scenarios.
 * You can extend character equality definition, enabling you to e.g.
   have wildcard characters, to have case insensitive alignment or to
   work with degenerate nucleotides.
 * It can easily handle small or very large sequences, even when finding
   alignment path, while consuming very little memory.
 * Super fast thanks to Myers's bit-vector algorithm.

edlib-aligner ile İlgili Diğer Paketler

• dep: libc6 (>= 2.34) [alpha, ia64, sh4 değil]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libedlib1 (= 1.2.7-5)

  library for sequence alignment using edit distance

• dep: libgcc-s1 (>= 3.0) [armel, armhf, hppa, ia64, m68k değil]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support library

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

edlib-aligner indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	22,1 kB	86,0 kB	[dosya listesi]
amd64	24,1 kB	66,0 kB	[dosya listesi]
arm64	22,4 kB	86,0 kB	[dosya listesi]
armel	19,8 kB	53,0 kB	[dosya listesi]
armhf	19,9 kB	49,0 kB	[dosya listesi]
hppa (resmi olmayan port)	22,6 kB	58,0 kB	[dosya listesi]
i386	23,1 kB	65,0 kB	[dosya listesi]
ia64 (resmi olmayan port)	27,5 kB	86,0 kB	[dosya listesi]
m68k (resmi olmayan port)	22,7 kB	61,0 kB	[dosya listesi]
mips64el	22,9 kB	87,0 kB	[dosya listesi]
ppc64 (resmi olmayan port)	24,9 kB	86,0 kB	[dosya listesi]
ppc64el	27,5 kB	86,0 kB	[dosya listesi]
riscv64	22,4 kB	54,0 kB	[dosya listesi]
s390x	26,5 kB	74,0 kB	[dosya listesi]
sh4 (resmi olmayan port)	24,5 kB	85,0 kB	[dosya listesi]
sparc64 (resmi olmayan port)	20,5 kB	1.047,0 kB	[dosya listesi]
x32 (resmi olmayan port)	24,1 kB	65,0 kB	[dosya listesi]