Paket: python-cogent (1.9-14 ve diğerleri) [debports]

python-cogent için bağlantılar

Debian Kaynakları:

Hata Raporları

Kaynak Paketini İndir:

Bulunamadı

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [pycogent.org]

Benzer paketler:

framework for genomic biology

PyCogent is a software library for genomic biology. It is a fully integrated and thoroughly tested framework for:

 * controlling third-party applications,
 * devising workflows; querying databases,
 * conducting novel probabilistic analyses of biological sequence
   evolution, and
 * generating publication quality graphics.

It is distinguished by many unique built-in capabilities (such as true codon alignment) and the frequent addition of entirely new methods for the analysis of genomic data.

python-cogent sağlayan paketler

python3-cogent3: framework for genomic biology

python-cogent ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.28) [sh4]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

dep: libc6 (>= 2.3.4) [hppa]

dep: libc6 (>= 2.4) [sparc64]
dep: python

Paket mevcut değil

dep: python (<< 2.8)

dep: python (>= 2.7~)
dep: python-matplotlib

Paket mevcut değil
dep: python-numpy (>= 1:1.13.1) [hppa]

Paket mevcut değil

dep: python-numpy (>= 1:1.14.3) [hppa değil]
dep: python-numpy-abi9

Paket mevcut değil

rec: blast2

Paket mevcut değil
rec: cd-hit

suite of programs designed to quickly group sequences
rec: clearcut

extremely efficient phylogenetic tree reconstruction
rec: dialign

Segment-based multiple sequence alignment
rec: muscle

Multiple alignment program of protein sequences

sug: cdbfasta

Constant DataBase indexing and retrieval tools for multi-FASTA files
sug: clustalw

global multiple nucleotide or peptide sequence alignment
sug: fasttree

phylogenetic trees from alignments of nucleotide or protein sequences
sug: mafft

Multiple alignment program for amino acid or nucleotide sequences
sug: mothur

sequence analysis suite for research on microbiota
sug: parsinsert

Parsimonious Insertion of unclassified sequences into phylogenetic trees
sug: python-cogent-doc

docs for python3-cogent3
sug: rdp-classifier

extensible sequence classifier for fungal lsu, bacterial and archaeal 16s
sug: rtax

Classification of sequence reads of 16S ribosomal RNA gene

python-cogent indir

Tüm mevcut mimariler için indir
Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
hppa (resmi olmayan port)	1.9-11+b1	2.388,2 kB	7.890,0 kB	[dosya listesi]
sh4 (resmi olmayan port)	1.9-14	2.420,6 kB	7.527,0 kB	[dosya listesi]
sparc64 (resmi olmayan port)	1.9-14	2.357,1 kB	7.877,0 kB	[dosya listesi]