Paket: pal2nal (14.1-3)

[ Kaynak: pal2nal  ]

converts proteins to genomic DNA alignment

PAL2NAL is a program that converts a multiple sequence alignment of proteins and the corresponding DNA (or mRNA) sequences into a codon-based DNA alignment. The program automatically assigns the corresponding codon sequence even if the input DNA sequence has mismatches with the input protein sequence, or contains UTRs, polyA tails. It can also deal with frame shifts in the input alignment, which is suitable for the analysis of pseudogenes. The resulting codon-based DNA alignment can further be subjected to the calculation of synonymous (Ks) and non-synonymous (Ka) substitution rates.

pal2nal ile İlgili Diğer Paketler

• rec: paml

  Phylogenetic Analysis by Maximum Likelihood (PAML)

pal2nal indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
all	17,3 kB	91,0 kB	[dosya listesi]