Paket: seqprep (1.3.2-3)

[ Kaynak: seqprep  ]

stripping adaptors and/or merging paired reads of DNA sequences with overlap

SeqPrep is a program to merge paired end Illumina reads that are overlapping into a single longer read. It may also just be used for its adapter trimming feature without doing any paired end overlap. When an adapter sequence is present, that means that the two reads must overlap (in most cases) so they are forcefully merged. When reads do not have adapter sequence they must be treated with care when doing the merging, so a much more specific approach is taken. The default parameters were chosen with specificity in mind, so that they could be ran on libraries where very few reads are expected to overlap. It is always safest though to save the overlapping procedure for libraries where you have some prior knowledge that a significant portion of the reads will have some overlap.

seqprep ile İlgili Diğer Paketler

• dep: libc6 (>= 2.17) [arm64]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.4) [arm64 değil]

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

seqprep indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	27,5 kB	95,0 kB	[dosya listesi]
arm64	25,4 kB	98,0 kB	[dosya listesi]
armhf	26,5 kB	90,0 kB	[dosya listesi]
i386	27,5 kB	90,0 kB	[dosya listesi]