Paket: zalign (0.9.1-5)

[ Kaynak: zalign  ]

parallel local alignment of biological sequences

zAlign is a local sequence aligner, especially intended for use with large biological DNA sequences, with more than 1Mbp (Millions of base pairs). It uses the Smith-Waterman exact algorithm with affine gap cost function to perform this task.

zAlign can be used both in distributed (clusters, for example) or standalone environments. Currently it has been tested on Linux and Sun Solaris, using both the MPICH (http://www.mcs.anl.gov/research/projects/mpi/mpich1/) and OpenMPI (http://www.open-mpi.org/) implementations. Ports for other Unix-like environments are highly considered.

zalign ile İlgili Diğer Paketler

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [amd64, arm64, ppc64el değil]

• dep: libgcc-s1 (>= 3.0) [armel, armhf değil]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libopenmpi3 (>= 4.0.5)

  high performance message passing library -- shared library

• dep: libstdc++6 (>= 4.9)

  GNU Standard C++ Library v3

zalign indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	47,9 kB	267,0 kB	[dosya listesi]
arm64	45,1 kB	263,0 kB	[dosya listesi]
armel	25,4 kB	117,0 kB	[dosya listesi]
armhf	25,6 kB	97,0 kB	[dosya listesi]
i386	48,4 kB	261,0 kB	[dosya listesi]
mips64el	50,3 kB	550,0 kB	[dosya listesi]
mipsel	48,9 kB	318,0 kB	[dosya listesi]
ppc64el	50,7 kB	415,0 kB	[dosya listesi]
s390x	46,5 kB	287,0 kB	[dosya listesi]