Paket: python3-cyvcf2 (0.30.4-4)

[ Kaynak: cyvcf2  ]

VCF parser based on htslib (Python 3)

This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.

cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.

This package installs the library for Python 3.

python3-cyvcf2 ile İlgili Diğer Paketler

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.7) [amd64, arm64, ppc64el değil]

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.10)

  dep: python3 (>= 3.9~)

• dep: python3-click

  Wrapper around optparse for command line utilities - Python 3.x

• dep: python3-coloredlogs

  colored terminal output for Python 3's logging module

• dep: python3-numpy (>= 1:1.16.0~rc1)

  Fast array facility to the Python 3 language

• dep: python3-numpy-abi9

  sanal paketi sağlayan python3-numpy

python3-cyvcf2 indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	787,7 kB	4.755,0 kB	[dosya listesi]
arm64	758,6 kB	4.694,0 kB	[dosya listesi]
armel	758,7 kB	4.662,0 kB	[dosya listesi]
armhf	759,8 kB	4.482,0 kB	[dosya listesi]
i386	787,5 kB	4.779,0 kB	[dosya listesi]
mips64el	742,9 kB	4.773,0 kB	[dosya listesi]
mipsel	743,9 kB	4.724,0 kB	[dosya listesi]
ppc64el	787,2 kB	4.870,0 kB	[dosya listesi]
s390x	751,4 kB	4.749,0 kB	[dosya listesi]