Paket: ncbi-blast+ (2.11.0+ds-1)

[ Kaynak: ncbi-blast+  ]

next generation suite of BLAST sequence search tools

The Basic Local Alignment Search Tool (BLAST) is the most widely used sequence similarity tool. There are versions of BLAST that compare protein queries to protein databases, nucleotide queries to nucleotide databases, as well as versions that translate nucleotide queries or databases in all six frames and compare to protein databases or queries. PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting with a protein query, and then uses that PSSM to perform further searches. It is also possible to compare a protein or nucleotide query to a database of PSSM’s. The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as a network service.

Etiketler: Alan: Biyoloji, Biyoinformatik, Geliştirildiği dil: implemented-in::c++, interface::commandline, Rol: Program, Amaç: use::analysing, works-with::biological-sequence

ncbi-blast+ ile İlgili Diğer Paketler

• dep: libbz2-1.0

  high-quality block-sorting file compressor library - runtime

• dep: libc6 (>= 2.29)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libgcc-s1 (>= 3.0) [s390x]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [amd64]

  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [mipsel]

  dep: libgcc-s1 (>= 4.5) [arm64, mips64el]

  dep: libgcc-s1 (>= 7) [i386]

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: liblmdb0 (>= 0.9.7)

  Lightning Memory-Mapped Database shared library

• dep: libmbedcrypto3 (>= 2.13)

  lightweight crypto and SSL/TLS library - crypto library

• dep: libmbedtls12 (>= 2.13)

  lightweight crypto and SSL/TLS library - tls library

• dep: libpcre3

  Old Perl 5 Compatible Regular Expression Library - runtime files

• dep: libstdc++6 (>= 9)

  GNU Standard C++ Library v3

• dep: ncbi-data

  Platform-independent data for the NCBI toolkit

• dep: perl

  Larry Wall's Practical Extraction and Report Language

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: zlib1g (>= 1:1.2.11.dfsg)

  compression library - runtime

• enh: t-coffee

  Multiple Sequence Alignment

ncbi-blast+ indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	11.027,6 kB	48.457,0 kB	[dosya listesi]
arm64	9.952,6 kB	46.144,0 kB	[dosya listesi]
armel	9.277,9 kB	39.361,0 kB	[dosya listesi]
armhf	9.512,3 kB	32.497,0 kB	[dosya listesi]
i386	11.910,6 kB	47.640,0 kB	[dosya listesi]
mips64el	8.183,2 kB	53.819,0 kB	[dosya listesi]
mipsel	8.264,3 kB	52.934,0 kB	[dosya listesi]
ppc64el	11.161,4 kB	59.079,0 kB	[dosya listesi]
s390x	9.900,3 kB	48.543,0 kB	[dosya listesi]