Paket: nanolyse (1.2.0-1)

[ Kaynak: nanolyse  ]

remove lambda phage reads from a fastq file

NanoLyse is a tool for rapid removal of contaminant DNA, using the Minimap2 aligner through the mappy Python binding. A typical application would be the removal of the lambda phage control DNA fragment supplied by ONT, for which the reference sequence is included in the package. However, this approach may lead to unwanted loss of reads from regions highly homologous to the lambda phage genome.

nanolyse ile İlgili Diğer Paketler

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-biopython

  Python3 library for bioinformatics

• dep: python3-mappy

  Python3 interface minimap2

nanolyse indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	24,5 kB	66,0 kB	[dosya listesi]
arm64	24,5 kB	66,0 kB	[dosya listesi]
armel	24,5 kB	66,0 kB	[dosya listesi]
armhf	24,5 kB	66,0 kB	[dosya listesi]
i386	24,5 kB	66,0 kB	[dosya listesi]
mips64el	24,5 kB	66,0 kB	[dosya listesi]
mipsel	24,5 kB	66,0 kB	[dosya listesi]
ppc64el	24,5 kB	66,0 kB	[dosya listesi]
s390x	24,5 kB	66,0 kB	[dosya listesi]