Paket: r-bioc-singler (2.0.0+ds-1)

[ Kaynak: r-bioc-singler  ]

BioConductor reference-based single-cell RNA-Seq annotation

Performs unbiased cell type recognition from single-cell RNA sequencing data, by leveraging reference transcriptomic datasets of pure cell types to infer the cell of origin of each single cell independently.

r-bioc-singler ile İlgili Diğer Paketler

• dep: libc6 (>= 2.32)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC support library

• dep: libstdc++6 (>= 12)

  GNU Standard C++ Library v3

• dep: r-api-4.0

  sanal paketi sağlayan r-base-core

• dep: r-api-bioc-3.16

  sanal paketi sağlayan r-bioc-biocgenerics

• dep: r-base-core (>= 4.2.2.20221110-1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-beachmat

  I/O for several formats storing matrix data

• dep: r-bioc-biocneighbors

  Nearest Neighbor Detection for Bioconductor Packages

• dep: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• dep: r-bioc-biocsingular

  Singular Value Decomposition for Bioconductor Packages

• dep: r-bioc-delayedarray

  BioConductor delayed operations on array-like objects

• dep: r-bioc-delayedmatrixstats

  Functions on Rows and Columns of 'DelayedMatrix' Objects

• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment

  BioConductor assay container

• dep: r-cran-matrix

  GNU R package of classes for dense and sparse matrices

• dep: r-cran-rcpp

  GNU R package for Seamless R and C++ Integration

• rec: r-bioc-ensembldb

  GNU R utilities to create and use an Ensembl based annotation database

• rec: r-bioc-scater

  Single-Cell Analysis Toolkit for Gene Expression Data in R

• rec: r-bioc-scran

  BioConductor methods for single-cell RNA-Seq data analysis

• rec: r-bioc-singlecellexperiment

  S4 Classes for Single Cell Data

• rec: r-cran-pheatmap

  GNU R package to create pretty heatmaps

• rec: r-cran-testthat

  GNU R testsuite

• sug: r-bioc-biocgenerics

  generic functions for Bioconductor

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-scrnaseq

  Collection of Public Single-Cell RNA-Seq Datasets

• sug: r-bioc-scuttle

  BioConductor single-cell RNA-Seq analysis utilities

• sug: r-cran-ggplot2

  implementation of the Grammar of Graphics

• sug: r-cran-gridextra

  GNU R package with extensions for the grid package

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-viridis

  GNU R package for color maps from matplotlib

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Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
s390x	377,7 kB	1.100,0 kB	[dosya listesi]