Package: sibelia (3.0.7+dfsg-3)

[ Source: sibelia  ]

comparative genomics tool

Sibelia (Synteny Block ExpLoration tool) is a comparative genomics tool: It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. Sibelia will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms.

Sibelia is useful in finding:

 1) shared regions,
 2) regions that present in one group of genomes but not in others,
 3) rearrangements that transform one genome to other genomes.

Other Packages Related to sibelia

• dep: lagan

  highly parametrizable pairwise global genome sequence aligner

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [not amd64, arm64, ppc64el]

• dep: libdivsufsort3 (>= 2.0.1)

  fast suffix array construction

• dep: libgcc-s1 (>= 3.0) [not armel, armhf]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 9)

  GNU Standard C++ Library v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• sug: sibelia-examples

  comparative genomics tool (example data)

Download sibelia

Download for all available architectures

Architecture	Package Size	Installed Size	Files
amd64	309.7 kB	1,176.0 kB	[list of files]
arm64	278.3 kB	1,120.0 kB	[list of files]
armel	283.4 kB	1,139.0 kB	[list of files]
armhf	289.5 kB	955.0 kB	[list of files]
i386	312.3 kB	1,151.0 kB	[list of files]
mips64el	278.1 kB	1,250.0 kB	[list of files]
ppc64el	305.1 kB	1,228.0 kB	[list of files]
s390x	275.7 kB	1,128.0 kB	[list of files]