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[ Source: seq-gen  ]

Package: seq-gen (1.3.3-1) [non-free]

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simulate the evolution of nucleotide or amino acid sequences

Seq-Gen is a program that will simulate the evolution of nucleotide or amino acid sequences along a phylogeny, using common models of the substitution process. A range of models of molecular evolution are implemented including the general reversible model. State frequencies and other parameters of the model may be given and site-specific rate heterogeneity may also be incorporated in a number of ways. Any number of trees may be read in and the program will produce any number of data sets for each tree. Thus large sets of replicate simulations can be easily created. It has been designed to be a general purpose simulator that incorporates most of the commonly used (and computationally tractable) models of molecular sequence evolution.

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Architecture Package Size Installed Size Files
amd64 72.6 kB190.0 kB [list of files]
armel 74.2 kB197.0 kB [list of files]
armhf 63.8 kB161.0 kB [list of files]
i386 65.4 kB181.0 kB [list of files]
kfreebsd-amd64 72.2 kB151.0 kB [list of files]
kfreebsd-i386 65.2 kB142.0 kB [list of files]
mips 70.7 kB188.0 kB [list of files]
mipsel 70.7 kB188.0 kB [list of files]
powerpc 68.1 kB177.0 kB [list of files]
s390x 71.8 kB191.0 kB [list of files]
sparc 67.1 kB177.0 kB [list of files]