Package: phipack (0.0.20160614-5)

[ Source: phipack  ]

PHI test and other tests of recombination

The PhiPack software package implements a few tests for recombination and can produce refined incompatibility matrices as well. Specifically, PHIPack implements the 'Pairwise Homoplasy Index', Maximum Chi2 and the 'Neighbour Similarity Score'. The program Phi can be run to produce a p-value of recombination within a data set and the program profile can be run to determine regions exhibiting strongest evidence mosaicism.

Other Packages Related to phipack

• dep: libc6 (>= 2.29)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0) [not armel, armhf]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 4.9)

  GNU Standard C++ Library v3

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Architecture	Package Size	Installed Size	Files
amd64	53.5 kB	256.0 kB	[list of files]
arm64	48.8 kB	232.0 kB	[list of files]
armel	46.4 kB	225.0 kB	[list of files]
armhf	44.7 kB	189.0 kB	[list of files]
i386	51.8 kB	249.0 kB	[list of files]
mips64el	50.9 kB	259.0 kB	[list of files]
ppc64el	58.0 kB	360.0 kB	[list of files]
s390x	48.7 kB	256.0 kB	[list of files]