Package: libvcflib-tools (1.0.9+dfsg1-3)

[ Source: libvcflib  ]

C++ library for parsing and manipulating VCF files (tools)

The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.

vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:

 * an API for parsing and operating on records of genomic variation as it can
   be described by the VCF format,
 * and a collection of command-line utilities for executing complex
   manipulations on VCF files.

This package contains several tools using the library.

Other Packages Related to libvcflib-tools

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• dep: libdisorder0 (>= 0.0.2)

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• dep: libfastahack0 (>= 0.0+git20160702.bbc645f)

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• dep: libgcc-s1 (>= 3.3.1) [not ppc64el]

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  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

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• dep: libstdc++6 (>= 13.1)

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• dep: libtabixpp0 (>= 1.0.0)

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• dep: libvcflib2 (>= 1.0.9+dfsg1)

  C++ library for parsing and manipulating VCF files

• dep: libwfa2-0 (>= 2.3.3)

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• dep: r-base-core

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