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[ Source: kalign  ]

Package: kalign (1:2.03+20110620-2)

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Global and progressive multiple sequence alignment

Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Muth-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment.

Tags: Biology: Clustal/ALN, Nucleic Acids, biology::peptidic, field::biology, Field: Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

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Download for all available architectures
Architecture Package Size Installed Size Files
amd64 92.6 kB244.0 kB [list of files]
armel 87.4 kB227.0 kB [list of files]
armhf 71.6 kB168.0 kB [list of files]
i386 76.6 kB217.0 kB [list of files]
kfreebsd-amd64 92.6 kB206.0 kB [list of files]
kfreebsd-i386 76.5 kB178.0 kB [list of files]
mips 81.8 kB228.0 kB [list of files]
mipsel 82.2 kB228.0 kB [list of files]
powerpc 83.7 kB219.0 kB [list of files]
s390x 98.8 kB260.0 kB [list of files]
sparc 76.9 kB211.0 kB [list of files]