Package: cassiopee (1.0.9-4)

[ Source: cassiopee  ]

index and search tool in genomic sequences

Cassiopee index and search library C implementation. It is a complete rewrite of the ruby Cassiopee gem. It scans an input genomic sequence (dna/rna/protein) and search for a subsequence with exact match or allowing substitutions (Hamming distance) and/or insertion/deletions.

This package contains the cassiopee and cassiopeeknife tools.

Other Packages Related to cassiopee

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libcassie1v5 (>= 1.0.9)

  library implementating search algorithms

• dep: libgcc-s1 (>= 3.0) [not armel, armhf]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libgoogle-glog0v6 (>= 0.6.0)

  library that implements application-level logging.

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

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armel	15.4 kB	56.0 kB	[list of files]
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