Package: blasr (5.3.5+dfsg-6 and others)

[ Source: blasr  ]

mapping single-molecule sequencing reads

Basic local alignment with successive refinement (BLASR) is a method for mapping single-molecule sequencing reads against a reference genome. Such reads are thousands of bases long, with divergence between them and the genome being dominated by insertion and deletion error.

Other Packages Related to blasr

• dep: libblasr5.3.5 (>= 5.3.5+dfsg)

  tools for aligning PacBio reads to target sequences

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC support library

• dep: libhdf5-cpp-103-1 (>= 1.10.5)

  HDF5 - C++ runtime files - serial version

• dep: libpbbam2.4.0 (>= 2.4.0+dfsg)

  Pacific Biosciences binary alignment/map (BAM) library

• dep: libpbcopper2.3.0 (>= 2.3.0+dfsg)

  data structures, algorithms, and utilities for C++ applications

• dep: libpbseq (>= 5.3.5+dfsg-4~)

  library for analyzing PacBio sequencing data

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

Download blasr

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
amd64	5.3.5+dfsg-6+b3	219.0 kB	664.0 kB	[list of files]
arm64	5.3.5+dfsg-6+b3	190.0 kB	616.0 kB	[list of files]
mips64el	5.3.5+dfsg-6+b3	197.4 kB	760.0 kB	[list of files]
ppc64el	5.3.5+dfsg-6+b3	215.2 kB	744.0 kB	[list of files]