alla flaggor
wheezy  ] [  sid  ]
[ Källkod: bowtie  ]

Paket: bowtie (0.12.7-3)

Länkar för bowtie

Screenshot

Debianresurser:

Hämta källkodspaketet bowtie:

Ansvariga:

Externa resurser:

Liknande paket:

ultrafast memory-efficient short read aligner

This package addresses the problem to interpret the results from the latest (2010) DNA sequencing technologies. Those will yield fairly short stretches and those cannot be interpreted directly. It is the challenge for tools like Bowtie to give a chromosomal location to the short stretches of DNA sequenced per run.

Bowtie aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep its memory footprint small: typically about 2.2 GB for the human genome (2.9 GB for paired-end).

Märken: Field: Biologi, Implemented in: C++, User Interface: interface::commandline, role::program, Scope: Utility, Purpose: Analysing, use::comparing, works-with::biological-sequence

Andra paket besläktade med bowtie

  • beror
  • rekommenderar
  • föreslår
  • enhances

Hämta bowtie

Hämtningar för alla tillgängliga arkitekturer
Arkitektur Paketstorlek Installerad storlek Filer
kfreebsd-i386 1.250,7 kbyte3.256,0 kbyte [filförteckning]