all options
wheezy  ] [  jessie  ] [  stretch  ] [  sid  ]
[ Source: cd-hit  ]

Package: cd-hit (4.6-2012-04-25-1)

Links for cd-hit


Debian Resources:

Download Source Package cd-hit:


External Resources:

Similar packages:

suite of programs designed to quickly group sequences

cd-hit contains a number of programs designed to quickly group sequences. cd-hit groups proteins into clusters that meet a user-defined similarity threshold. cd-hit-est is similar to cd-hit, but designed to group nucleotide sequences (without introns). cd-hit-est-2d is similar to cd-hit-2d but designed to compare two nucleotide datasets. A number of other related programs are also in this package. Please see the cd-hit user manual, also part of this package, for further information.

Other Packages Related to cd-hit

  • depends
  • recommends
  • suggests
  • enhances

Download cd-hit

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 687.6 kB1,285.0 kB [list of files]
armel 685.5 kB1,227.0 kB [list of files]
armhf 646.2 kB1,043.0 kB [list of files]
i386 690.5 kB1,295.0 kB [list of files]
ia64 882.2 kB2,002.0 kB [list of files]
kfreebsd-amd64 681.3 kB1,243.0 kB [list of files]
kfreebsd-i386 684.8 kB1,249.0 kB [list of files]
mips 697.7 kB1,328.0 kB [list of files]
mipsel 700.2 kB1,328.0 kB [list of files]
powerpc 722.2 kB1,299.0 kB [list of files]
s390 693.0 kB1,274.0 kB [list of files]
s390x 718.6 kB1,376.0 kB [list of files]
sparc 689.6 kB1,255.0 kB [list of files]