all options
squeeze  ] [  wheezy  ] [  jessie  ] [  stretch  ] [  sid  ]
[ Source: picard-tools  ]

Package: picard-tools (1.27-1)

Links for picard-tools


Debian Resources:

Download Source Package picard-tools:


External Resources:

Similar packages:

Command line tools to manipulate SAM and BAM files

SAM (Sequence Alignment/Map) format is a generic format for storing large nucleotide sequence alignments. Picard Tools includes these utilities to manipulate SAM and BAM files: BamToBfq MeanQualityByCycle BuildBamIndex MergeBamAlignment CalculateHsMetrics MergeSamFiles CleanSam NormalizeFasta CollectAlignmentSummaryMetrics QualityScoreDistribution CollectGcBiasMetrics ReplaceSamHeader CollectInsertSizeMetrics RevertSam CompareSAMs SamFormatConverter CreateSequenceDictionary SamToFastq EstimateLibraryComplexity SortSam FastqToSam ValidateSamFile FixMateInformation ViewSam MarkDuplicates

Other Packages Related to picard-tools

  • depends
  • recommends
  • suggests
  • enhances

Download picard-tools

Download for all available architectures
Architecture Package Size Installed Size Files
all 253.5 kB764.0 kB [list of files]