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[ Source: mustang  ]

Package: mustang (3.2.1-1)

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multiple structural alignment of proteins

Mustang is an algorithm to align multiple protein structures. Given a set of PDB files, the program uses the spatial information in the Calpha atoms of the set to produce a sequence alignment. Based on a progressive pairwise heuristic the algorithm then proceeds through a number of refinement passes. Mustang reports the multiple sequence alignment and the corresponding superposition of structures.

When using this program please cite A.S. Konagurthu, J.C. Whisstock, P.J. Stuckey, A.M. Lesk, "MUSTANG: A multiple structural alignment algorithm." Proteins: Structure, Function, and Bioinformatics. 64(3):559-574.

Tags: Biology: Proteins, Field: Biology, Bioinformatics, Implemented in: C++, User Interface: Command Line, Role: Program, Purpose: Analysing, Comparing, Supports Format: Plain Text

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Architecture Package Size Installed Size Files
i386 79.8 kB232.0 kB [list of files]