Källkodspaket: circlator (1.5.6-5)
Länkar för circlator
Debianresurser:
Ansvariga:
Externa resurser:
- Hemsida [sanger-pathogens.github.io]
Följande binärpaket byggs från detta källkodspaket:
- circlator
- circularize genome assemblies
Andra paket besläktade med circlator
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- arkitekturoberoende bygg-beroende
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-
- adep:
debhelper-compat
(= 13)
- Paketet inte tillgängligt
-
- adep:
dh-python
- Debian helper tools for packaging Python libraries and applications
-
- adep:
python3-all
- package depending on all supported Python 3 runtime versions
-
- adep:
python3-setuptools
- Python3 Distutils Enhancements
-
- adep:
python3-openpyxl
- Python 3 module to read/write OpenXML xlsx/xlsm files
-
- adep:
python3-jdcal
- Julian dates from proleptic Gregorian and Julian calendars
-
- adep:
fastaq
(>= 3.12.1)
- FASTA and FASTQ file manipulation tools
-
- adep:
python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
-
- adep:
python3-pymummer
- Python 3 interface to MUMmer
-
- adep:
python3-nose
- test discovery and running for Python3 unittest
-
- adep:
spades
- genome assembler for single-cell and isolates data sets
-
- adep:
bwa
(>= 0.7.12)
- Burrows-Wheeler Aligner
-
- adep:
prodigal
- Microbial (bacterial and archaeal) gene finding program
-
- adep:
canu
(<< 1.8+dfsg-1)
- single molecule sequence assembler for genomes
- eller
canu
(>= 1.8+dfsg-2)
- single molecule sequence assembler for genomes
