Paket: maq (0.7.1-9) [debports]

[ Källkod:  ]

maps short fixed-length polymorphic DNA sequence reads to reference sequences

Maq (short for Mapping and Assembly with Quality) builds mapping assemblies from short reads generated by the next-generation sequencing machines. It was particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has a preliminary functionality to handle ABI SOLiD data. Maq is previously known as mapass2.

Developmemt of Maq stopped in 2008. Its successors are BWA and SAMtools.

Andra paket besläktade med maq

• dep: libc6 (>= 2.31)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 4.2)

  GCC stödbibliotek

• dep: libstdc++6 (>= 5)

  GNU standardbibliotek v3 för C++

• dep: zlib1g (>= 1:1.2.3.3)

  Kompressionsbibliotek - körtidspaket

• sug: bwa

  Burrows-Wheeler Aligner

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

Hämta maq

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
sh4 (inofficiell anpassning)	318,8 kbyte	527,0 kbyte	[filförteckning]